pyNAVIS.dataset_gen¶
DatasetGenerators¶
-
class
pyNAVIS.dataset_gen.
DatasetGenerators
[source]¶ Methods:
generate_histogram_dataset
(…[, …])Automatically generates and saves histograms in CSV format from a set of AEDAT files.
generate_phaselock_dataset
(…[, …])Automatically generates and saves phaselocked AEDAT files from a set of AEDAT files.
generate_sonogram_dataset
(path_input_folder, …)Automatically generates and saves sonograms from a set of AEDAT files.
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static
generate_histogram_dataset
(path_input_folder, path_output_folder, settings, allow_subdirectories=False, verbose=False)[source]¶ Automatically generates and saves histograms in CSV format from a set of AEDAT files.
- Parameters
path_input_folder (string) – Path of the folder where AEDAT files are.
path_output_folder (string) – Path of the folder where CSV files with the histogram information will be saved.
settings (MainSettings) – Configuration parameters of the files in the path_input_folder.
allow_subdirectories (boolean, optional) – Allow the function to navigate deeper in the path_input_folder folder structure to look for input files.
verbose (boolean, optional) – Set to True if you want the execution time of the function to be printed.
- Returns
None.
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static
generate_phaselock_dataset
(path_input_folder, path_output_folder, settings, allow_subdirectories=False, verbose=False)[source]¶ Automatically generates and saves phaselocked AEDAT files from a set of AEDAT files.
- Parameters
path_input_folder (string) – Path of the folder where AEDAT files are.
path_output_folder (string) – Path of the folder where phaselocked AEDAT files will be saved.
settings (MainSettings) – Configuration parameters of the files in the path_input_folder.
allow_subdirectories (boolean, optional) – Allow the function to navigate deeper in the path_input_folder folder structure to look for input files.
verbose (boolean, optional) – Set to True if you want the execution time of the function to be printed.
- Returns
None.
-
static
generate_sonogram_dataset
(path_input_folder, path_output_folder, settings, allow_subdirectories=False, verbose=False)[source]¶ Automatically generates and saves sonograms from a set of AEDAT files.
- Parameters
path_input_folder (string) – Path of the folder where AEDAT files are.
path_output_folder (string) – Path of the folder where sonogram images will be saved.
settings (MainSettings) – Configuration parameters of the files in the path_input_folder.
allow_subdirectories (boolean, optional) – Allow the function to navigate deeper in the path_input_folder folder structure to look for input files.
verbose (boolean, optional) – Set to True if you want the execution time of the function to be printed.
- Returns
None.
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static